Micromonospora sp. ATCC 39149

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sp. ATCC 39149
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora sp. ATCC 39149 cont1.339, whole genome shotgun

Gene Summary

Adenine Count

898320 bp

Thymine Count

901727 bp

Guanine Count

2354588 bp

Cytosine Count

2350391 bp

Genome Length

6505026 bp

Protein-coding Genes

5682 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporter substrate-binding domain-containing protein [micromonospora rosaria]-Not AvailablePositive6394919 - 639606442057.4
hypothetical protein [micromonospora lupini]-Not AvailablePositive6396028 - 639707136883.1
endo-1,4-beta-xylanase [micromonospora pisi]-Not AvailableNegative6397265 - 639859647340.1
pqq-dependent sugar dehydrogenase [micromonospora endophytica (xie et al. 2001) li et al. 2019]-Not AvailablePositive6399007 - 640053052708.9
is110 family transposase [streptomyces acidiscabies]-Not AvailablePositive6400855 - 64010406774.27
response regulator transcription factor [lentzea aerocolonigenes]-Not AvailableNegative6401654 - 640232523765.0
isl3 family transposase [micromonospora olivasterospora]-P9WKH6Positive6402765 - 640337321575.6
radical sam protein [sinosporangium album]-Not AvailableNegative6403427 - 640458443028.0
atp-grasp domain-containing protein [lentzea aerocolonigenes]-Q4H4E7Positive6404929 - 640632650521.5
type iii plp-dependent enzyme [lentzea aerocolonigenes]-Q2L4H3Positive6406323 - 640761246641.1

Displaying genes 5661 – 5670 of 5753 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

400 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 400 metabolites

Health Effects

No health effects information available for this bacterium.