Sulfitobacter dubius

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Sulfitobacter

Description

Sulfitobacter dubius is a Gram-negative, rod-shaped bacterium that is non-spore-forming and exhibits an aerobic metabolism, thriving optimally at a temperature of 25.0°C. This microbe is characterized by its ability to utilize sulfur compounds, which may play a role in sulfur cycling in its environment. As a member of the marine microbial community, S. dubius is likely involved in biogeochemical processes that contribute to the degradation of organic matter and the transformation of sulfur species. Its aerobic nature suggests that it requires oxygen for growth and energy production, positioning it within environments where oxygen is readily available, such as coastal waters or sediment layers that are well-oxygenated. The physiological traits of S. dubius suggest that it may have specific ecological roles, particularly in habitats where sulfur compounds are prevalent. The organism's metabolic capabilities could enable it to participate in the oxidation of sulfides or thiosulfates, thereby influencing sulfur dynamics in marine ecosystems. This positions S. dubius as an important player in the maintenance of ecological balance and nutrient cycling within its niche. Further research could illuminate its specific interactions within microbial communities and its contributions to biogeochemical processes in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSulfitobacter
SpeciesSulfitobacter dubius
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sulfitobacter dubius strain DSM 16472 genome assembly, contig:

Gene Summary

Adenine Count

732817 bp

Thymine Count

730204 bp

Guanine Count

1107888 bp

Cytosine Count

1100625 bp

Genome Length

3671544 bp

Protein-coding Genes

3544 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bacterial peptide chain release factor 2 (brf-2)SAMN04488039_101958Not AvailableNegative970140 - 97126441212.9
penicillin-binding protein 1aSAMN04488039_101959Not AvailableNegative971388 - 97401596907.1
n-acetylmuramoyl-l-alanine amidaseSAMN04488039_101960Not AvailableNegative974073 - 97529343245.6
aspartate/methionine/tyrosine aminotransferaseSAMN04488039_101961Not AvailableNegative975353 - 97649540875.6
protein-disulfide isomeraseSAMN04488039_101962Not AvailablePositive976592 - 97734127311.5
hypothetical proteinSAMN04488039_101963Not AvailablePositive977445 - 97782813727.6
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseSAMN04488039_101964Not AvailableNegative977989 - 97911339777.9
protein rodz, contains xre-like hth and duf4115 domainsSAMN04488039_101965Not AvailableNegative979201 - 98049045777.0
5-aminolevulinate synthaseSAMN04488039_101966Not AvailableNegative980611 - 98183444370.2
two-component sensor histidine kinase, contains hiska and hatpase domainsSAMN04488039_101967Not AvailablePositive982022 - 98314040629.6

Displaying genes 961 – 970 of 3607 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.