Paenibacillus pasadenensis str. R16

rodaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus pasadenensis strain R16 is a Gram-positive, rod-shaped bacterium characterized by its spore-forming capability and aerobic metabolism. This microorganism exhibits a robust ability to thrive in oxygen-rich environments, which is indicative of its metabolic requirements and ecological adaptations. As a member of the Paenibacillus genus, strain R16 is likely to possess traits common to its relatives, such as the ability to degrade complex organic materials, which may contribute to nutrient cycling in its natural habitat. The spore-forming ability of this strain allows it to endure adverse environmental conditions, providing a survival advantage in fluctuating ecosystems. The aerobic nature of Paenibacillus pasadenensis str. R16 may facilitate interactions with other microbial residents in its environment, potentially influencing community dynamics. Its role in the decomposition of organic matter could be significant in soil health and fertility, emphasizing the importance of such microorganisms in maintaining ecosystem balance. Overall, the physiological traits of strain R16 suggest it may play a vital role in its ecological niche, particularly in the context of organic matter turnover and nutrient cycling in aerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus pasadenensis
StrainR16

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus pasadenensis strain R16

Gene Summary

Adenine Count

1060108 bp

Thymine Count

1051400 bp

Guanine Count

1830857 bp

Cytosine Count

1810850 bp

Genome Length

5753219 bp

Protein-coding Genes

4970 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-n-arabinofuranosidaseB8V81_4147Not AvailablePositive4770964 - 477248156899.5
abc-type polysaccharide transport system, permease componentB8V81_4148Not AvailablePositive4772787 - 477374936492.3
putative abc transporter permease protein ytcpB8V81_4149Not AvailablePositive4773771 - 477465532110.9
lipoprotein lpla precursorB8V81_4150Not AvailablePositive4774684 - 477627957854.3
two-component response regulator yesnB8V81_4151Not AvailablePositive4776564 - 477876882648.7
hypothetical proteinB8V81_4152Not AvailablePositive4779022 - 478158996423.3
putative rhamnogalacturonan lyaseB8V81_4153Not AvailablePositive4781586 - 478286046998.1
methylthioribulose-1-phosphate dehydrataseB8V81_4154Not AvailableNegative4782968 - 478363024939.6
2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphataseB8V81_4155Not AvailableNegative4783627 - 478432526479.3
2,3-diketo-5-methylthiopentyl-1-phosphate enolaseB8V81_4156Not AvailableNegative4784387 - 478563444101.0

Displaying genes 4211 – 4220 of 5094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.