Paenibacillus pasadenensis str. R16

rodaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus pasadenensis strain R16 is a Gram-positive, rod-shaped bacterium characterized by its spore-forming capability and aerobic metabolism. This microorganism exhibits a robust ability to thrive in oxygen-rich environments, which is indicative of its metabolic requirements and ecological adaptations. As a member of the Paenibacillus genus, strain R16 is likely to possess traits common to its relatives, such as the ability to degrade complex organic materials, which may contribute to nutrient cycling in its natural habitat. The spore-forming ability of this strain allows it to endure adverse environmental conditions, providing a survival advantage in fluctuating ecosystems. The aerobic nature of Paenibacillus pasadenensis str. R16 may facilitate interactions with other microbial residents in its environment, potentially influencing community dynamics. Its role in the decomposition of organic matter could be significant in soil health and fertility, emphasizing the importance of such microorganisms in maintaining ecosystem balance. Overall, the physiological traits of strain R16 suggest it may play a vital role in its ecological niche, particularly in the context of organic matter turnover and nutrient cycling in aerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus pasadenensis
StrainR16

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus pasadenensis strain R16

Gene Summary

Adenine Count

1060108 bp

Thymine Count

1051400 bp

Guanine Count

1830857 bp

Cytosine Count

1810850 bp

Genome Length

5753219 bp

Protein-coding Genes

4970 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna ligase clustered with ku protein, ligdB8V81_3270Not AvailableNegative3788366 - 378966145799.6
ku domain proteinB8V81_3271Not AvailableNegative3789713 - 379067834406.4
hypothetical proteinB8V81_3272Not AvailablePositive3790673 - 37907894066.15
hypothetical proteinB8V81_3273Not AvailablePositive3790848 - 379124314548.7
hypothetical proteinB8V81_3274Not AvailablePositive3791297 - 37914947286.59
hypothetical proteinB8V81_3275Not AvailableNegative3791541 - 37917417625.08
putative membrane protein (yqfu)B8V81_3276Not AvailablePositive3792018 - 379289331750.6
tsae protein, required for threonylcarbamoyladenosine t(6)a37 formation in trnaB8V81_3277Not AvailablePositive3792897 - 379454658009.5
ribosomal-protein-s18p-alanine acetyltransferaseB8V81_3278Not AvailablePositive3794533 - 379506019644.3
tsad/kae1/qri7 protein, required for threonylcarbamoyladenosine t(6)a37 formation in trnaB8V81_3279Not AvailablePositive3795057 - 379610636930.7

Displaying genes 3311 – 3320 of 5094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.