Paenibacillus pasadenensis str. R16

rodaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus pasadenensis strain R16 is a Gram-positive, rod-shaped bacterium characterized by its spore-forming capability and aerobic metabolism. This microorganism exhibits a robust ability to thrive in oxygen-rich environments, which is indicative of its metabolic requirements and ecological adaptations. As a member of the Paenibacillus genus, strain R16 is likely to possess traits common to its relatives, such as the ability to degrade complex organic materials, which may contribute to nutrient cycling in its natural habitat. The spore-forming ability of this strain allows it to endure adverse environmental conditions, providing a survival advantage in fluctuating ecosystems. The aerobic nature of Paenibacillus pasadenensis str. R16 may facilitate interactions with other microbial residents in its environment, potentially influencing community dynamics. Its role in the decomposition of organic matter could be significant in soil health and fertility, emphasizing the importance of such microorganisms in maintaining ecosystem balance. Overall, the physiological traits of strain R16 suggest it may play a vital role in its ecological niche, particularly in the context of organic matter turnover and nutrient cycling in aerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus pasadenensis
StrainR16

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus pasadenensis strain R16

Gene Summary

Adenine Count

1060108 bp

Thymine Count

1051400 bp

Guanine Count

1830857 bp

Cytosine Count

1810850 bp

Genome Length

5753219 bp

Protein-coding Genes

4970 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative l-lactate dehydrogenase, fe-s oxidoreductase subunit ykgeB8V81_3070Not AvailablePositive3539671 - 354039926798.4
putative l-lactate dehydrogenase, iron-sulfur cluster-binding subunit ykgfB8V81_3071Not AvailablePositive3540396 - 354192255393.6
putative l-lactate dehydrogenase, hypothetical protein subunit ykggB8V81_3072Not AvailablePositive3541915 - 354285933404.3
transcriptional regulator, gntr familyB8V81_3073Not AvailablePositive3542887 - 354359725907.3
oxidoreductase domain proteinB8V81_3074Not AvailablePositive3543643 - 354462335276.2
catalaseB8V81_3075Not AvailableNegative3544751 - 354569834155.8
zinc metalloproteinase precursorB8V81_3076Not AvailableNegative3545871 - 354745756009.0
hypothetical proteinB8V81_3077Not AvailablePositive3547369 - 35474884405.32
aconitate hydrataseB8V81_3078Not AvailableNegative3548041 - 355075598548.3
hypothetical proteinB8V81_3079Not AvailablePositive3551125 - 355232744972.8

Displaying genes 3111 – 3120 of 5094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.