Paenibacillus pasadenensis str. R16

rodaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus pasadenensis strain R16 is a Gram-positive, rod-shaped bacterium characterized by its spore-forming capability and aerobic metabolism. This microorganism exhibits a robust ability to thrive in oxygen-rich environments, which is indicative of its metabolic requirements and ecological adaptations. As a member of the Paenibacillus genus, strain R16 is likely to possess traits common to its relatives, such as the ability to degrade complex organic materials, which may contribute to nutrient cycling in its natural habitat. The spore-forming ability of this strain allows it to endure adverse environmental conditions, providing a survival advantage in fluctuating ecosystems. The aerobic nature of Paenibacillus pasadenensis str. R16 may facilitate interactions with other microbial residents in its environment, potentially influencing community dynamics. Its role in the decomposition of organic matter could be significant in soil health and fertility, emphasizing the importance of such microorganisms in maintaining ecosystem balance. Overall, the physiological traits of strain R16 suggest it may play a vital role in its ecological niche, particularly in the context of organic matter turnover and nutrient cycling in aerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus pasadenensis
StrainR16

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus pasadenensis strain R16

Gene Summary

Adenine Count

1060108 bp

Thymine Count

1051400 bp

Guanine Count

1830857 bp

Cytosine Count

1810850 bp

Genome Length

5753219 bp

Protein-coding Genes

4970 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease proteolytic subunitB8V81_2394Not AvailableNegative2762421 - 276299620853.0
rna polymerase ecf-type sigma factorB8V81_2395Not AvailablePositive2763195 - 276373119626.4
hypothetical proteinB8V81_2396Not AvailablePositive2763828 - 27640526838.9
3-oxoacyl-[acyl-carrier protein] reductase-likeB8V81_2397Not AvailableNegative2765113 - 276589227949.4
l-serine dehydratase, beta subunitB8V81_2398Not AvailablePositive2766586 - 276730525071.9
l-serine dehydratase, alpha subunitB8V81_2399Not AvailablePositive2767274 - 276815830585.7
sugar abc transporter substrate-binding proteinB8V81_2400Not AvailablePositive2768416 - 276967246109.5
n-acetyl-d-glucosamine abc transport system, permease protein 1B8V81_2401Not AvailablePositive2769731 - 277069335922.3
n-acetyl-d-glucosamine abc transport system, permease protein 2B8V81_2402Not AvailablePositive2770695 - 277151330071.4
n-acetylmuramoyl-l-alanine amidaseB8V81_2403Not AvailablePositive2771955 - 277223610190.1

Displaying genes 2421 – 2430 of 5094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.