Vibrio vulnificus CMCP6

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio vulnificus is a lactose-fermenting, halophilic, gram-negative, opportunistic pathogenic bacterium from the same family as those that cause cholera. It normally lives in warm seawater and is part of a group of vibrios that are called "halophilic" because they are salt requiring organisms.This organism causes wound infections, gastroenteritis, or a syndrome known as primary septicemia.Found in warm coastal waters, this bacterium is related to the cholera pathogen and can cause a severe and potentially fatal illness. Infections tend to occur through eating raw or improperly cooked shellfish, particularly oysters. The ingestion of V. vulnificus by healthy individuals can result in gastroenteritis. The "primary septicemia" form of the disease can follow.Wound infections result either from contaminating an open wound with sea water harboring the organism, or by lacerating part of the body on coral, fish, etc., followed by contamination with the organism.Persons who are immunocompromised, especially those with chronic liver disease, are more at risk from Vibrio vulnificus. There is no evidence for person-to-person transmission.(From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio vulnificus
StrainCMCP6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio vulnificus CMCP6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityYes

Genome Summary

Vibrio vulnificus CMCP6 chromosome I, complete sequence.

Gene Summary

Adenine Count

875259 bp

Thymine Count

882154 bp

Guanine Count

765292 bp

Cytosine Count

759156 bp

Genome Length

3281866 bp

Protein-coding Genes

2972 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus (msha type) biogenesis protein mshlVV1_RS06790Not AvailablePositive1418168 - 141981458942.8
exea family proteinVV1_RS06795Not AvailablePositive1419822 - 142067031909.0
tetratricopeptide repeat proteinVV1_RS06800Not AvailablePositive1420667 - 142178840103.6
gspe/pule family proteinVV1_RS06805Not AvailablePositive1421785 - 142350963676.0
type ii secretion system f family proteinVV1_RS06810Not AvailablePositive1423519 - 142473944997.8
hypothetical proteinVV1_RS06815Not AvailablePositive1424743 - 142520417780.6
prepilin-type n-terminal cleavage/methylation domain-containing proteinVV1_RS06820Not AvailablePositive1425283 - 142586120563.0
type ii secretion system proteinVV1_RS25345Not AvailablePositive1425895 - 142635015358.3
type ii secretion system proteinVV1_RS06830Not AvailablePositive1426403 - 142688816616.7
prepilin-type n-terminal cleavage/methylation domain-containing proteinVV1_RS06835Not AvailablePositive1426888 - 142745420351.0

Displaying genes 1361 – 1370 of 4684 in total

Metabolites

1928 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1928 metabolites

Health Effects

No health effects information available for this bacterium.