Pseudomonas [fluorescens] SBW25

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens SBW25 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as a heterotrophic aerobe, thriving optimally at a temperature of 25.0°C. This strain is known for its versatile metabolic capabilities, enabling it to utilize a variety of organic compounds as energy sources. Pseudomonas fluorescens species, including SBW25, are commonly found in diverse habitats, often in soil and water environments, where they play crucial roles in nutrient cycling and organic matter degradation. The ability of Pseudomonas fluorescens SBW25 to thrive in multiple habitats highlights its ecological flexibility and resilience. This adaptability may contribute to its importance in bioremediation processes, where it can assist in the breakdown of pollutants, thereby improving environmental health. Moreover, the strain's aerobic nature indicates that it requires oxygen for growth, which can affect its distribution and interactions within various ecosystems. Overall, Pseudomonas fluorescens SBW25 serves as a model organism for studying microbial ecology and the dynamics of microbial communities in natural environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas [fluorescens] SBW25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas [fluorescens] SBW25, complete sequence.

Gene Summary

Adenine Count

1322487 bp

Thymine Count

1332609 bp

Guanine Count

2034487 bp

Cytosine Count

2032956 bp

Genome Length

6722539 bp

Protein-coding Genes

5969 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail proteinPFLU_RS05865Not AvailablePositive1315371 - 131638136690.8
LysozymePFLU_RS05870Not AvailablePositive1316403 - 131696020542.6
RzPFLU_RS05875Not AvailablePositive1316948 - 131744817918.4
cina family proteinPFLU_RS05880Not AvailablePositive1317530 - 131803017644.9
Dna strand exchange and recombination protein with protease and nuclease activityPFLU_RS05885Not AvailablePositive1318115 - 131917337524.3
recombination regulator recxPFLU_RS05890Not AvailablePositive1319182 - 131964918004.6
Hypothetical proteinPFLU_RS05895Not AvailableNegative1319893 - 132100541617.7
pa3611 family quorum-sensing-regulated virulence factorPFLU_RS05900Not AvailableNegative1321383 - 132182316076.8
AttlNot AvailableNot AvailablePositive1733709 - 1733730Not Available
Putative dna-binding response regulatorPFLU_RS07795Not AvailablePositive1734379 - 173556043377.4

Displaying genes 21 – 30 of 6160 in total

Metabolites

1789 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1789 metabolites

Health Effects

No health effects information available for this bacterium.