Croceibacter atlanticus HTCC2559

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Croceibacter

Description

Croceibacter atlanticus HTCC2559T was cultivated from seawater collected at a depth of 250 m from the Sargasso Sea and was isolated by high throughput dilution-to-extinction culturing. It is a bright saffron-colored, strictly aerobic, obligate chemoheterotroph. Cells are non-motile straight rods, about 1.9 um long and 0.4 um wide, dividing by binary fission. Temperature range for growth is 10 - 28 degrees C, with optimum growth at 20 - 23 degrees C with no growth observed at 4 and 30 degrees C. The pH range for growth is pH 6.0 - 10.0, with optimum growth at pH 7.5 - 8.0. It is moderately halophilic, showing good growth at NaCl concentrations of 0.5 - 15% (w/v), with optimal growth at 3.0% (w/v) NaCl. As suggested by it color, it produces carotenoid pigments with wavelength absorbance spectral peaks at 318 and 483 nm. There was no difference in the spectral peaks between light-grown and dark-grown cultures. It degrades gelatin, DNA, starch, casein, and elastin, but not cellulose (adapted from PMID 12747413 and 20639333). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCroceibacter
SpeciesCroceibacter atlanticus
StrainHTCC2559

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Croceibacter atlanticus HTCC2559
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Croceibacter atlanticus HTCC2559, complete sequence.

Gene Summary

Adenine Count

971329 bp

Thymine Count

980578 bp

Guanine Count

496240 bp

Cytosine Count

504815 bp

Genome Length

2952962 bp

Protein-coding Genes

2673 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterCA2559_RS01260Not AvailableNegative305806 - 30714649100.0
glutaredoxin family proteinCA2559_RS01265Not AvailableNegative307202 - 30754313013.2
tonb-dependent receptorCA2559_RS01270Not AvailableNegative307623 - 31027195493.0
laci family dna-binding transcriptional regulatorCA2559_RS01275Not AvailablePositive310452 - 31147738141.4
trna epoxyqueuosine(34) reductase quegCA2559_RS01280Not AvailableNegative311474 - 31240335298.9
hypothetical proteinCA2559_RS01285Not AvailableNegative312406 - 3126579453.42
holliday junction branch migration dna helicase ruvbCA2559_RS01290Not AvailableNegative312657 - 31367937360.9
peroxiredoxin-like family proteinCA2559_RS01295Not AvailablePositive313816 - 31432219240.9
cytochrome c oxidase subunit iCA2559_RS01300Not AvailableNegative314395 - 31622167822.9
cytochrome c oxidase subunit iiCA2559_RS01305Not AvailableNegative316248 - 31732741298.5

Displaying genes 251 – 260 of 2719 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.