Croceibacter atlanticus HTCC2559

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Croceibacter

Description

Croceibacter atlanticus HTCC2559T was cultivated from seawater collected at a depth of 250 m from the Sargasso Sea and was isolated by high throughput dilution-to-extinction culturing. It is a bright saffron-colored, strictly aerobic, obligate chemoheterotroph. Cells are non-motile straight rods, about 1.9 um long and 0.4 um wide, dividing by binary fission. Temperature range for growth is 10 - 28 degrees C, with optimum growth at 20 - 23 degrees C with no growth observed at 4 and 30 degrees C. The pH range for growth is pH 6.0 - 10.0, with optimum growth at pH 7.5 - 8.0. It is moderately halophilic, showing good growth at NaCl concentrations of 0.5 - 15% (w/v), with optimal growth at 3.0% (w/v) NaCl. As suggested by it color, it produces carotenoid pigments with wavelength absorbance spectral peaks at 318 and 483 nm. There was no difference in the spectral peaks between light-grown and dark-grown cultures. It degrades gelatin, DNA, starch, casein, and elastin, but not cellulose (adapted from PMID 12747413 and 20639333). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCroceibacter
SpeciesCroceibacter atlanticus
StrainHTCC2559

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Croceibacter atlanticus HTCC2559
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Croceibacter atlanticus HTCC2559, complete sequence.

Gene Summary

Adenine Count

971329 bp

Thymine Count

980578 bp

Guanine Count

496240 bp

Cytosine Count

504815 bp

Genome Length

2952962 bp

Protein-coding Genes

2673 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional gnat family n-acetyltransferase/carbon-nitrogen hydrolase family proteinCA2559_RS00515Not AvailableNegative127795 - 12932758503.9
deoxyhypusine synthase family proteinCA2559_RS00520Not AvailableNegative129494 - 13046836795.9
agmatinaseCA2559_RS00525Not AvailableNegative130458 - 13140835751.8
arginine decarboxylaseCA2559_RS00530Not AvailableNegative131411 - 13287156460.1
duf3347 domain-containing proteinCA2559_RS00535Not AvailableNegative133836 - 13438120065.7
exosortase f system-associated membrane proteinCA2559_RS00540Not AvailableNegative134416 - 13485016860.4
exosortase family protein xrtfCA2559_RS00545Not AvailableNegative134847 - 13539520991.0
gaf domain-containing proteinCA2559_RS00550Not AvailablePositive135427 - 13590917888.1
abc transporter permeaseCA2559_RS00555Not AvailableNegative135925 - 13717845957.0
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseCA2559_RS00560Not AvailablePositive137372 - 13890455857.4

Displaying genes 101 – 110 of 2719 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.