Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_0003 | Not Available | - | 1932 - 2306 | 11575.4 |
| Large subunit ribosomal rna | Not Available | Not Available | + | 2378 - 5248 | Not Available |
| abc transporter related | APY03_0004 | Not Available | - | 2424 - 4271 | 65157.0 |
| high-affinity branched-chain amino acid transport system permease protein livh | APY03_0005 | Not Available | - | 4268 - 5323 | 36258.7 |
| 5s ribosomal rna | Not Available | Not Available | + | 5365 - 5480 | Not Available |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | APY03_0006 | Not Available | - | 5364 - 6524 | 40500.1 |
| 3-phenylpropionate dioxygenase beta subunit | APY03_0007 | Not Available | - | 6557 - 7021 | 17548.0 |
| 3-phenylpropionate dioxygenase alpha subunit | APY03_0008 | A8A344 | - | 7018 - 8334 | 49441.6 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | APY03_0009 | Q8YEE8 | - | 8373 - 9536 | 40335.6 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | APY03_0010 | Not Available | - | 9518 - 10675 | 40628.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.