Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate coa-transferase subunit b | APY03_0061 | Q8VPF2 | + | 65570 - 66301 | 26528.4 |
| long-chain-fatty-acid--coa ligase | APY03_0062 | Q0K844 | + | 66298 - 67797 | 52907.9 |
| transcriptional regulator, gntr family | APY03_0063 | Not Available | + | 67919 - 68635 | 26490.3 |
| taurine-binding periplasmic protein taua | APY03_0064 | Not Available | + | 68753 - 69796 | 37292.1 |
| taurine transport atp-binding protein taub | APY03_0065 | Not Available | + | 69800 - 70624 | 30025.1 |
| taurine abc transporter, permease protein | APY03_0066 | Not Available | + | 70621 - 71433 | 28853.8 |
| putative sphingosine-1-phosphate lyase | APY03_0067 | O95470 | + | 71442 - 72683 | 44652.4 |
| alpha/beta hydrolase fold | APY03_0068 | Not Available | - | 72717 - 73469 | 26611.7 |
| hypothetical protein | APY03_0069 | Not Available | - | 73567 - 74199 | 22900.1 |
| conserved hypothetical outer membrane protein | APY03_0070 | Not Available | - | 74246 - 74893 | 23023.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.