Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | APY03_0051 | Not Available | - | 54935 - 55573 | 23208.9 |
| 3-isopropylmalate dehydratase large subunit | APY03_0052 | Q89X98 | - | 55570 - 56985 | 49999.3 |
| putative exported protein | APY03_0053 | Not Available | - | 56975 - 58009 | 36608.1 |
| transcriptional regulator, gntr family protein | APY03_0054 | P13669 | + | 58075 - 58830 | 27387.3 |
| transcriptional regulator, iclr family | APY03_0055 | Not Available | + | 58878 - 59675 | 29096.2 |
| transcriptional regulator, lysr family | APY03_0056 | Not Available | - | 59682 - 60617 | 33377.3 |
| putative exported protein | APY03_0057 | Not Available | + | 61861 - 62826 | 33730.0 |
| caib/baif family protein | APY03_0058 | Not Available | + | 62841 - 64010 | 41792.8 |
| enoyl-coa hydratase | APY03_0059 | P64015 | + | 64019 - 64729 | 25791.9 |
| 3-oxoadipate coa-transferase subunit a | APY03_0060 | Not Available | + | 64741 - 65577 | 29390.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.