Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_0031 | Not Available | - | 36376 - 36498 | 4694.69 |
| hypothetical protein | APY03_0032 | Not Available | - | 36495 - 37643 | 40645.5 |
| general secretion pathway protein d | APY03_0033 | Q52498 | - | 37649 - 39508 | 65883.0 |
| type iii secretion protein, hrpo family | APY03_0034 | Not Available | - | 39517 - 39783 | 9540.03 |
| type iii secretion inner membrane channel protein (lcrd,hrcv,escv,ssav) | APY03_0035 | P35656 | - | 39827 - 41899 | 74389.4 |
| hypothetical protein | APY03_0036 | Not Available | + | 41960 - 42100 | 5126.63 |
| type iii secretion inner membrane protein (yscq,homologous to flagellar export components) | APY03_0037 | Not Available | + | 42196 - 43272 | 38371.9 |
| type iii secretion inner membrane protein | APY03_0038 | P37828 | + | 43290 - 43949 | 24051.3 |
| amidohydrolase 2 | APY03_0039 | Not Available | + | 44148 - 45521 | 50678.1 |
| transcriptional regulator, gntr family | APY03_0040 | Not Available | - | 45622 - 46320 | 26102.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.