Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. WDL1
Accession NumberLMTS00000000.1
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier protein] reductase | APY03_0011 | P0AEK2 | - | 10811 - 11542 | 25680.3 |
| hypothetical protein | APY03_0012 | A0NLY7 | - | 11562 - 12464 | 33214.4 |
| oxidoreductase, short chain dehydrogenase/reductase family | APY03_0013 | Not Available | - | 12498 - 13748 | 45404.8 |
| hypothetical protein | APY03_0014 | Not Available | - | 13745 - 14914 | 41520.4 |
| long-chain-fatty-acid--coa ligase | APY03_0015 | Q83MG9 | - | 14911 - 16533 | 58460.6 |
| 3-phenylpropionate dioxygenase beta subunit | APY03_0016 | Not Available | - | 16541 - 17026 | 18858.4 |
| 3-phenylpropionate dioxygenase alpha subunit | APY03_0017 | A5W4F2 | - | 17026 - 18339 | 49720.9 |
| flavodoxin reductases (ferredoxin-nadph reductases) family 1 | APY03_0018 | Q47914 | - | 18361 - 19344 | 35742.8 |
| indolepyruvate oxidoreductase subunit iorb ii | APY03_0019 | Not Available | - | 19367 - 20860 | 53979.8 |
| liga | APY03_0020 | Not Available | + | 21273 - 25733 | 158561.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.