Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | APY03_2995 | Not Available | Positive | 3065506 - 3066630 | 39797.8 |
| 3-ketoacyl-coa thiolase acetyl-coa acetyltransferase | APY03_2996 | Q4L3Q1 | Positive | 3066627 - 3067835 | 42919.2 |
| long-chain-fatty-acid--coa ligase | APY03_2997 | P94547 | Positive | 3067832 - 3069376 | 55776.0 |
| hypothetical protein | APY03_2998 | Not Available | Positive | 3069390 - 3069707 | 12271.8 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | APY03_2999 | Not Available | Positive | 3069704 - 3070864 | 40461.8 |
| Trna-asp | Not Available | Not Available | Positive | 3071029 - 3071105 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3071176 - 3071251 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3071304 - 3071379 | Not Available |
| glutamyl-trna synthetase | APY03_3000 | Q21V06 | Negative | 3071415 - 3072686 | 46868.2 |
| o-acetylhomoserine sulfhydrylase | APY03_3001 | P55218 | Negative | 3072802 - 3074016 | 42937.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.