Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative relaxase | APY03_2505 | Not Available | Negative | 2567282 - 2569654 | 90979.9 |
| putative relaxosome component | APY03_2506 | Not Available | Negative | 2569656 - 2570018 | 13083.5 |
| hypothetical protein | APY03_2507 | Not Available | Positive | 2570544 - 2570876 | 11865.9 |
| stability protein | APY03_2508 | Not Available | Positive | 2570882 - 2571589 | 25983.1 |
| hypothetical protein | APY03_2509 | Not Available | Positive | 2571664 - 2572155 | 17329.6 |
| type iv secretory pathway vird4 components-like protein | APY03_2510 | Not Available | Positive | 2572152 - 2573759 | 58324.9 |
| minor pilin of type iv secretion complex, virb5 | APY03_2511 | Q2YJ75 | Positive | 2574306 - 2575031 | 26717.7 |
| hypothetical protein | APY03_2512 | Not Available | Positive | 2575043 - 2575540 | 18634.6 |
| incq plasmid conjugative transfer protein trag | APY03_2513 | Not Available | Positive | 2575537 - 2575797 | 9057.98 |
| integral inner membrane protein of type iv secretion complex (virb6) | APY03_2514 | Not Available | Positive | 2575799 - 2576875 | 38515.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.