Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WDL1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362220 bp
Thymine Count
1364786 bp
Guanine Count
2698508 bp
Cytosine Count
2704493 bp
Genome Length
8145223 bp
Protein-coding Genes
7744 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APY03_2265 | Not Available | Negative | 2342892 - 2343074 | 6924.39 |
| higa protein (antitoxin to higb) | APY03_2266 | Q46561 | Positive | 2343416 - 2343760 | 12650.2 |
| hypothetical protein | APY03_2267 | Not Available | Positive | 2343804 - 2344346 | 19846.9 |
| hypothetical protein | APY03_2268 | Not Available | Positive | 2344461 - 2346539 | 76896.4 |
| hypothetical protein | APY03_2269 | Not Available | Positive | 2346539 - 2347528 | 35496.7 |
| hypothetical protein | APY03_2270 | Not Available | Positive | 2347541 - 2349448 | 71090.8 |
| hemolysin activator protein precursor | APY03_2271 | Q7CGD8 | Negative | 2349534 - 2351228 | 60931.8 |
| phosphonate abc transporter phosphate-binding periplasmic component | APY03_2272 | Not Available | Negative | 2351494 - 2352546 | 38069.6 |
| phosphonate abc transporter phosphate-binding periplasmic component | APY03_2273 | Not Available | Negative | 2352506 - 2353990 | 53842.1 |
| putative virulence regulator protein | APY03_2274 | O34206 | Positive | 2354657 - 2355706 | 38327.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.