Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | C1O30_RS07620 | Not Available | Positive | 1681664 - 1682182 | 19085.4 |
| Hypothetical protein | C1O30_RS07625 | Not Available | Positive | 1682296 - 1684149 | 67909.5 |
| duf1795 domain-containing protein | C1O30_RS07630 | Not Available | Positive | 1684163 - 1684570 | 14980.8 |
| Baseplate puncturing device | C1O30_RS07635 | Not Available | Positive | 1684582 - 1688964 | 163547.0 |
| hypothetical protein | C1O30_RS07640 | Not Available | Positive | 1688957 - 1689436 | 18608.2 |
| rhs repeat-associated core domain-containing protein | C1O30_RS07645 | Not Available | Positive | 1689544 - 1690681 | 39524.1 |
| hypothetical protein | C1O30_RS07650 | Not Available | Positive | 1690678 - 1691235 | 21451.6 |
| hypothetical protein | C1O30_RS07655 | Not Available | Negative | 1691519 - 1692445 | 35587.3 |
| duf736 domain-containing protein | C1O30_RS07665 | Not Available | Positive | 1693474 - 1693635 | 6009.08 |
| Prophage p4 integrase | C1O30_RS07670 | Not Available | Negative | 1693791 - 1695074 | 49127.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
