Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5983 family protein | C1O30_RS04605 | Not Available | Positive | 999631 - 999948 | 11877.2 |
| n-6 dna methylase | C1O30_RS04610 | Not Available | Positive | 1000049 - 1000732 | 25479.6 |
| dna-binding protein | C1O30_RS04615 | Not Available | Positive | 1000891 - 1001193 | 11221.6 |
| atp-binding protein | C1O30_RS04620 | Not Available | Positive | 1001190 - 1003277 | 79201.1 |
| dna cytosine methyltransferase | C1O30_RS04625 | Not Available | Positive | 1003270 - 1004355 | 40174.5 |
| duf4238 domain-containing protein | C1O30_RS04630 | Not Available | Negative | 1004468 - 1005499 | 40661.4 |
| uvrd-helicase domain-containing protein | C1O30_RS04635 | Not Available | Positive | 1005641 - 1007143 | 56396.6 |
| conjugal transfer nickase/helicase domain-containing protein | C1O30_RS04640 | Not Available | Positive | 1007227 - 1008822 | 57544.6 |
| site-specific integrase | C1O30_RS04645 | Not Available | Positive | 1008908 - 1009936 | 40461.8 |
| Trna-phe | Not Available | Not Available | Positive | 1010133 - 1010208 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
