Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | C1O30_RS04505 | Not Available | Positive | 978064 - 978957 | 32784.8 |
| nudix domain-containing protein | C1O30_RS04510 | Not Available | Positive | 979083 - 979535 | 17382.8 |
| sulfite exporter taue/safe family protein | C1O30_RS04515 | Not Available | Negative | 979532 - 980260 | 25384.3 |
| hypothetical protein | C1O30_RS04520 | Not Available | Positive | 980539 - 981363 | 31381.5 |
| sdr family oxidoreductase | C1O30_RS04525 | Not Available | Negative | 981747 - 982856 | 41299.4 |
| mipa/ompv family protein | C1O30_RS04530 | Not Available | Negative | 983333 - 984118 | 28584.1 |
| response regulator | C1O30_RS04535 | Not Available | Positive | 984272 - 984967 | 25346.9 |
| sensor histidine kinase | C1O30_RS04540 | Not Available | Positive | 984964 - 986133 | 43632.5 |
| efflux rnd transporter periplasmic adaptor subunit | C1O30_RS04545 | Not Available | Positive | 986262 - 987404 | 40237.2 |
| efflux rnd transporter permease subunit | C1O30_RS04550 | Not Available | Positive | 987401 - 990469 | 109781.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
