Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | C1O30_RS04110 | Not Available | Positive | 885811 - 888090 | 82130.0 |
| yaii/yqxd family protein | C1O30_RS04115 | Not Available | Negative | 888145 - 888594 | 16572.8 |
| oxygen-dependent coproporphyrinogen oxidase | C1O30_RS04120 | Not Available | Negative | 888591 - 889529 | 35547.6 |
| gnat family acetyltransferase | C1O30_RS04125 | Not Available | Positive | 889751 - 890176 | 16315.6 |
| tonb family protein | C1O30_RS04130 | Not Available | Positive | 890499 - 891377 | 31100.6 |
| tonb-dependent receptor plug domain-containing protein | C1O30_RS04135 | Not Available | Positive | 891420 - 893990 | 97259.7 |
| m16 family metallopeptidase | C1O30_RS04140 | Not Available | Positive | 894123 - 896927 | 105254.0 |
| abc transporter atp-binding protein/permease | C1O30_RS04145 | Not Available | Positive | 896924 - 898585 | 63072.3 |
| rpoe-regulated lipoprotein | C1O30_RS04150 | Not Available | Positive | 898809 - 899399 | 21316.4 |
| duf1870 family protein | C1O30_RS04155 | Not Available | Positive | 899644 - 900000 | 14089.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
