Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | C1O30_RS04055 | Not Available | Negative | 876820 - 877302 | 18244.0 |
| type ii toxin-antitoxin system rata family toxin | C1O30_RS04060 | Not Available | Positive | 877458 - 877892 | 15922.2 |
| rnfh family protein | C1O30_RS04065 | Not Available | Positive | 877885 - 878178 | 10908.2 |
| outer membrane protein assembly factor bame | C1O30_RS04070 | Not Available | Negative | 878250 - 878594 | 12660.3 |
| dna repair protein recn | C1O30_RS04075 | Not Available | Negative | 878706 - 880367 | 61930.9 |
| nad(+) kinase | C1O30_RS04080 | Not Available | Negative | 880451 - 881329 | 32258.6 |
| nucleotide exchange factor grpe | C1O30_RS04090 | Not Available | Positive | 881480 - 882067 | 21766.0 |
| nramp family divalent metal transporter | C1O30_RS04095 | Not Available | Positive | 882392 - 883627 | 43880.3 |
| gdp-mannose pyrophosphatase nudk | C1O30_RS04100 | Not Available | Positive | 883782 - 884366 | 21899.3 |
| transaldolase | C1O30_RS04105 | Not Available | Negative | 884432 - 885382 | 35256.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
