Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | C1O30_RS04005 | Not Available | Negative | 867474 - 868034 | 20715.9 |
| parb family protein | C1O30_RS04010 | Not Available | Negative | 868046 - 869770 | 63089.6 |
| type ii toxin-antitoxin system hica family toxin | C1O30_RS21775 | Not Available | Negative | 869778 - 870023 | 9072.91 |
| is3 family transposase | C1O30_RS21820 | Not Available | Negative | 870007 - 870836 | 30746.0 |
| alpa family transcriptional regulator | C1O30_RS04025 | Not Available | Negative | 870870 - 871082 | 8266.03 |
| hypothetical protein | C1O30_RS04030 | Not Available | Negative | 871791 - 872558 | 28328.6 |
| transposase | C1O30_RS04035 | Not Available | Negative | 872747 - 873622 | 33053.4 |
| is3 family transposase | C1O30_RS04040 | Not Available | Positive | 873823 - 874971 | 41661.9 |
| integrase domain-containing protein | C1O30_RS04045 | Not Available | Negative | 875011 - 876240 | 46880.9 |
| Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 876406 - 876769 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
