Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toll/interleukin-1 receptor domain-containing protein | C1O30_RS03955 | Not Available | Positive | 857581 - 858132 | 20611.3 |
| hypothetical protein | C1O30_RS21670 | Not Available | Positive | 858411 - 858611 | 7255.68 |
| duf3085 domain-containing protein | C1O30_RS03965 | Not Available | Negative | 858699 - 859064 | 13594.9 |
| gtpase | C1O30_RS03970 | Not Available | Negative | 859213 - 860010 | 30111.9 |
| dna cytosine methyltransferase | C1O30_RS03975 | Not Available | Negative | 860396 - 861868 | 52773.8 |
| dna topoisomerase iii | C1O30_RS03980 | Not Available | Negative | 862393 - 864405 | 74055.8 |
| is3 family transposase | C1O30_RS03985 | Not Available | Negative | 864524 - 864640 | 4489.07 |
| duf3158 family protein | C1O30_RS03990 | Not Available | Negative | 864731 - 865261 | 19611.7 |
| pfl_4669 family integrating conjugative element protein | C1O30_RS03995 | Not Available | Negative | 865258 - 866076 | 30014.3 |
| sty4528 family pathogenicity island replication protein | C1O30_RS04000 | Not Available | Negative | 866260 - 867474 | 44983.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
