Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad/nadp octopine/nopaline dehydrogenase family protein | C1O30_RS03760 | Not Available | Positive | 816167 - 817330 | 43827.5 |
| hypothetical protein | C1O30_RS03765 | Not Available | Positive | 817347 - 818312 | 36495.9 |
| daph/dapd/glmu-related protein | C1O30_RS03770 | Not Available | Positive | 818309 - 819211 | 32390.3 |
| sdr family oxidoreductase | C1O30_RS03775 | Not Available | Positive | 819186 - 819953 | 27575.5 |
| atp-grasp domain-containing protein | C1O30_RS03780 | Not Available | Positive | 819950 - 821218 | 47429.2 |
| mfs transporter | C1O30_RS03785 | Not Available | Positive | 821273 - 822433 | 41828.5 |
| lyse family translocator | C1O30_RS03790 | Not Available | Positive | 822426 - 823016 | 21724.2 |
| conjugative transfer atpase | C1O30_RS03795 | Not Available | Negative | 823357 - 826203 | 106734.0 |
| tigr03751 family conjugal transfer lipoprotein | C1O30_RS03800 | Not Available | Negative | 826203 - 826640 | 16339.3 |
| tigr03752 family integrating conjugative element protein | C1O30_RS03805 | Not Available | Negative | 826621 - 828021 | 49830.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
