Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C1O30_RS00030 | Not Available | Negative | 6499 - 7686 | 41369.5 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | C1O30_RS00035 | Not Available | Negative | 7898 - 8650 | 27240.1 |
| oligopeptidase a | C1O30_RS00040 | Not Available | Negative | 8647 - 10689 | 76661.7 |
| duf2623 family protein | C1O30_RS00045 | Not Available | Negative | 10815 - 11099 | 10661.5 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | C1O30_RS00050 | Not Available | Positive | 11285 - 12127 | 32406.1 |
| ribonuclease z | C1O30_RS00055 | Not Available | Negative | 12167 - 13081 | 33029.7 |
| rna repair transcriptional activator rtcr | C1O30_RS00060 | Not Available | Negative | 13092 - 14681 | 60222.6 |
| spfh domain-containing protein | C1O30_RS00065 | Not Available | Positive | 14935 - 15828 | 33602.7 |
| rtcb family protein | C1O30_RS00070 | Not Available | Positive | 15898 - 17124 | 45018.1 |
| nucleotidyltransferase domain-containing protein | C1O30_RS00075 | Not Available | Positive | 17146 - 17931 | 29841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
