Dickeya zeae str. MS2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya zeae
StrainMS2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya zeae strain MS2 chromosome, complete genome.

Gene Summary

Adenine Count

1103787 bp

Thymine Count

1102832 bp

Guanine Count

1265585 bp

Cytosine Count

1267848 bp

Genome Length

4740052 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hcp family type vi secretion system effectorC1O30_RS03605Not AvailablePositive785579 - 78609719085.4
type vi secretion system tip protein vgrgC1O30_RS03610Not AvailablePositive786210 - 78807267982.7
dcrb-related proteinC1O30_RS03615Not AvailablePositive788090 - 78859018303.6
rhs repeat-associated core domain-containing proteinC1O30_RS03620Not AvailablePositive788608 - 792786155024.0
toxinC1O30_RS03625Not AvailablePositive792798 - 79364331819.6
rhs domain-containing proteinC1O30_RS21645Not AvailablePositive793654 - 79446931554.6
rhs repeat-associated core domain-containing proteinC1O30_RS21650Not AvailablePositive794430 - 79496019715.3
immunity 22 family proteinC1O30_RS03635Not AvailablePositive794962 - 79535114915.2
sigma-54 interaction domain-containing proteinC1O30_RS03640Not AvailablePositive795836 - 79743758598.4
mobh family relaxaseC1O30_RS03645Not AvailableNegative797523 - 79932267326.2

Displaying genes 781 – 790 of 4237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.