Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C1O30_RS03295 | Not Available | Positive | 716444 - 717178 | 27071.0 |
| glycosyltransferase family 9 protein | C1O30_RS03300 | Not Available | Positive | 717178 - 718497 | 50306.5 |
| glycosyltransferase family 4 protein | C1O30_RS03305 | Not Available | Positive | 718546 - 719685 | 43303.5 |
| glycosyltransferase family 4 protein | C1O30_RS03310 | Not Available | Positive | 719693 - 720802 | 42268.0 |
| is3 family transposase | C1O30_RS03315 | Not Available | Positive | 720956 - 721063 | 4061.94 |
| polysaccharide biosynthesis protein | C1O30_RS03320 | Not Available | Negative | 721122 - 722993 | 69326.3 |
| udp-glucose 4-epimerase family protein | C1O30_RS03325 | Not Available | Positive | 723145 - 724119 | 34925.3 |
| sugar transferase | C1O30_RS03330 | Not Available | Positive | 724129 - 724677 | 20390.4 |
| abc transporter substrate-binding protein | C1O30_RS03335 | Not Available | Negative | 724757 - 726079 | 48853.4 |
| abc transporter atp-binding protein | C1O30_RS03340 | Not Available | Negative | 726072 - 727157 | 40308.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
