Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein gcvh | C1O30_RS03195 | Not Available | Positive | 694620 - 695027 | 14511.5 |
| aminomethyl-transferring glycine dehydrogenase | C1O30_RS03200 | Not Available | Positive | 695197 - 698070 | 104312.0 |
| hd domain-containing protein | C1O30_RS03205 | Not Available | Negative | 698150 - 698758 | 22933.5 |
| paqr family membrane homeostasis protein trha | C1O30_RS03210 | Not Available | Positive | 698971 - 699621 | 23463.6 |
| pp_00617 | C1O30_RS03215 | Not Available | Negative | 699698 - 700678 | Not Available |
| fad assembly factor sdhe | C1O30_RS03220 | Not Available | Positive | 700988 - 701254 | 10405.5 |
| protein ygfx | C1O30_RS03225 | Not Available | Positive | 701235 - 701666 | 16920.6 |
| flavodoxin fldb | C1O30_RS03230 | Not Available | Negative | 701755 - 702273 | 19659.5 |
| mfs transporter | C1O30_RS03235 | Not Available | Negative | 702450 - 703775 | 47186.8 |
| site-specific tyrosine recombinase xerd | C1O30_RS03240 | Not Available | Positive | 704039 - 704938 | 34279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
