Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | C1O30_RS20225 | Not Available | Negative | 4482787 - 4484046 | 43835.4 |
| Tail fiber assembly protein | C1O30_RS20230 | Not Available | Negative | 4484378 - 4484800 | 15482.3 |
| Tail fiber protein | C1O30_RS20235 | Not Available | Negative | 4484803 - 4486110 | 45926.5 |
| hypothetical protein | C1O30_RS20240 | Not Available | Positive | 4486467 - 4486955 | 18687.0 |
| cell-envelope stress modulator cpxp | C1O30_RS20245 | Not Available | Negative | 4487188 - 4487751 | 21159.0 |
| Putative dna-binding response regulator | C1O30_RS20250 | Not Available | Positive | 4487951 - 4488649 | 26381.9 |
| chromosomal replication initiator protein dnaa | C1O30_RS00010 | Not Available | Positive | 270 - 1658 | 52136.4 |
| dna polymerase iii subunit beta | C1O30_RS00015 | Not Available | Positive | 1663 - 2763 | 40606.0 |
| dna replication/repair protein recf | C1O30_RS00020 | Not Available | Positive | 2905 - 3990 | 40576.5 |
| dna topoisomerase (atp-hydrolyzing) subunit b | C1O30_RS00025 | Not Available | Positive | 4008 - 6419 | 89727.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
