Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(55) synthase trub | C1O30_RS03050 | Not Available | Positive | 665734 - 666690 | 35520.7 |
| 30s ribosomal protein s15 | C1O30_RS03055 | Not Available | Positive | 666798 - 667067 | 10223.5 |
| polyribonucleotide nucleotidyltransferase | C1O30_RS03060 | Not Available | Positive | 667368 - 669488 | 76707.1 |
| lipoprotein nlpi | C1O30_RS03065 | Not Available | Positive | 669616 - 670500 | 33674.9 |
| protein yrbn | C1O30_RS21810 | Not Available | Positive | 670609 - 670668 | 2300.06 |
| dead/deah family atp-dependent rna helicase | C1O30_RS03070 | Not Available | Positive | 670681 - 672558 | 70326.3 |
| luciferase-like monooxygenase | C1O30_RS03075 | Not Available | Negative | 672641 - 673660 | 37355.8 |
| u32 family peptidase | C1O30_RS03080 | Not Available | Negative | 673779 - 674657 | 33113.6 |
| ubiquinone anaerobic biosynthesis protein ubiu | C1O30_RS03085 | Not Available | Negative | 674676 - 675674 | 37125.0 |
| ubiquinone anaerobic biosynthesis accessory factor ubit | C1O30_RS03090 | Not Available | Positive | 675995 - 676519 | 19874.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
