Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna-binding transcriptional regulator | C1O30_RS12185 | Not Available | Positive | 2687342 - 2687533 | 7234.68 |
| guanine deaminase | C1O30_RS12190 | Not Available | Positive | 2687923 - 2689227 | 48730.9 |
| Gp350 | C1O30_RS12195 | Not Available | Positive | 2689450 - 2691264 | 68832.4 |
| Hypothetical protein | C1O30_RS20190 | Not Available | Negative | 4476588 - 4477058 | 18043.9 |
| Nudix hydrolase | C1O30_RS20195 | Not Available | Positive | 4477261 - 4477725 | 17837.1 |
| Tail fiber protein | C1O30_RS20200 | Not Available | Negative | 4477758 - 4478888 | 40004.7 |
| Tail fiber assembly protein | C1O30_RS20205 | Not Available | Negative | 4479182 - 4479802 | 23125.8 |
| Tail fiber protein | C1O30_RS20210 | Not Available | Negative | 4479802 - 4480731 | 33493.9 |
| Tail fiber protein | C1O30_RS20215 | Not Available | Negative | 4480995 - 4482146 | 40779.2 |
| Putative phage tail fiber protein | C1O30_RS20220 | Not Available | Negative | 4482398 - 4482778 | 14239.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
