Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulokinase | C1O30_RS02355 | Not Available | Negative | 515410 - 516882 | 54061.6 |
| hth-type transcriptional activator rhas | C1O30_RS02360 | Not Available | Positive | 517230 - 518066 | 32050.0 |
| hth-type transcriptional activator rhar | C1O30_RS02365 | Not Available | Positive | 518111 - 518965 | 33026.6 |
| hypothetical protein | C1O30_RS02370 | Not Available | Negative | 518981 - 519226 | 9334.54 |
| hypothetical protein | C1O30_RS02375 | Not Available | Negative | 519417 - 519686 | 10683.5 |
| dipeptide abc transporter atp-binding protein | C1O30_RS02380 | Not Available | Negative | 519866 - 521566 | 61031.6 |
| abc transporter permease | C1O30_RS02385 | Not Available | Negative | 521563 - 522474 | 32267.6 |
| abc transporter permease | C1O30_RS02390 | Not Available | Negative | 522464 - 523429 | 34785.5 |
| abc transporter substrate-binding protein | C1O30_RS02395 | Not Available | Negative | 523407 - 525032 | 58804.2 |
| yagu family protein | C1O30_RS02400 | Not Available | Negative | 525334 - 525873 | 20600.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
