Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | C1O30_RS02200 | Not Available | Positive | 483891 - 484340 | 16883.2 |
| carboxymuconolactone decarboxylase family protein | C1O30_RS02205 | Not Available | Positive | 484337 - 484768 | 15773.0 |
| deor/glpr family dna-binding transcription regulator | C1O30_RS02210 | Not Available | Negative | 484860 - 485651 | 28506.5 |
| transketolase | C1O30_RS02215 | Not Available | Positive | 485997 - 486800 | 28764.6 |
| transketolase family protein | C1O30_RS02220 | Not Available | Positive | 486800 - 487723 | 33040.8 |
| gold/dthd family dehydrogenase | C1O30_RS02225 | Not Available | Positive | 487737 - 488540 | 28506.3 |
| d-ribose abc transporter substrate-binding protein | C1O30_RS02230 | Not Available | Positive | 488646 - 489581 | 32991.7 |
| duf2291 family protein | C1O30_RS02235 | Not Available | Positive | 489626 - 490249 | 22577.9 |
| sugar abc transporter atp-binding protein | C1O30_RS02240 | Not Available | Positive | 490285 - 491847 | 57707.9 |
| abc transporter permease | C1O30_RS02245 | Not Available | Positive | 491864 - 492931 | 37651.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
