Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | C1O30_RS02095 | Not Available | Positive | 463063 - 464162 | 43163.0 |
| abortive infection system antitoxin abigi family protein | C1O30_RS02100 | Not Available | Positive | 464666 - 465478 | 31454.5 |
| sensor domain-containing diguanylate cyclase | C1O30_RS02110 | Not Available | Positive | 466304 - 467743 | 55180.0 |
| sam-dependent methyltransferase | C1O30_RS02115 | Not Available | Negative | 467864 - 468589 | 27247.1 |
| pirin family protein | C1O30_RS02120 | Not Available | Positive | 469003 - 469857 | 30553.4 |
| hypothetical protein | C1O30_RS02125 | Not Available | Negative | 470054 - 470392 | 12048.2 |
| hypothetical protein | C1O30_RS02130 | Not Available | Positive | 471000 - 471626 | 22148.4 |
| hypothetical protein | C1O30_RS02135 | Not Available | Negative | 471773 - 472186 | 14902.5 |
| hypothetical protein | C1O30_RS02140 | Not Available | Positive | 472407 - 473213 | 29947.7 |
| lrp/asnc family transcriptional regulator | C1O30_RS02145 | Not Available | Negative | 473391 - 473873 | 18266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
