Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | C1O30_RS02045 | Not Available | Positive | 447345 - 448412 | 39246.3 |
| methyl-accepting chemotaxis protein | C1O30_RS02050 | Not Available | Positive | 448554 - 450173 | 58044.4 |
| valine--trna ligase | C1O30_RS02055 | Not Available | Negative | 450325 - 453180 | 108218.0 |
| dna polymerase iii subunit chi | C1O30_RS02060 | Not Available | Negative | 453194 - 453643 | 16812.9 |
| leucyl aminopeptidase | C1O30_RS02065 | Not Available | Negative | 453758 - 455266 | 54618.8 |
| lps export abc transporter permease lptf | C1O30_RS02070 | Not Available | Positive | 455549 - 456667 | 41136.0 |
| lps export abc transporter permease lptg | C1O30_RS02075 | Not Available | Positive | 456669 - 457739 | 39280.7 |
| Trna-leu | Not Available | Not Available | Positive | 457963 - 458047 | Not Available |
| is3 family transposase | C1O30_RS02085 | Not Available | Positive | 458266 - 459536 | 47360.9 |
| sir2 family protein | C1O30_RS02090 | Not Available | Positive | 459654 - 462767 | 119817.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
