Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 380937 - 381315 | Not Available |
| 4,5-dopa dioxygenase extradiol | C1O30_RS01745 | Not Available | Positive | 381491 - 382279 | 28865.3 |
| glutathionylspermidine synthase family protein | C1O30_RS01750 | Not Available | Negative | 382347 - 383507 | 44858.9 |
| duf1190 family protein | C1O30_RS01755 | Not Available | Negative | 383519 - 384247 | 25665.8 |
| outer membrane channel protein tolc | C1O30_RS01760 | Not Available | Negative | 384421 - 385833 | 50591.3 |
| adp-ribose diphosphatase | C1O30_RS01765 | Not Available | Positive | 386236 - 386874 | 23685.9 |
| duf1249 family protein | C1O30_RS01770 | Not Available | Positive | 386871 - 387293 | 16508.0 |
| 3',5'-cyclic-amp phosphodiesterase | C1O30_RS01775 | Not Available | Positive | 387402 - 388229 | 30806.7 |
| esterase yqia | C1O30_RS01780 | Not Available | Positive | 388229 - 388810 | 21706.1 |
| dna topoisomerase iv subunit b | C1O30_RS01790 | Not Available | Positive | 389012 - 390907 | 69955.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
