Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C1O30_RS20825 | Not Available | Negative | 4618826 - 4619716 | 31838.3 |
| mfs transporter | C1O30_RS20830 | Not Available | Negative | 4619747 - 4620928 | 41250.8 |
| iron-containing redox enzyme family protein | C1O30_RS20835 | Not Available | Positive | 4621161 - 4621769 | 22738.3 |
| sdr family oxidoreductase | C1O30_RS20840 | Not Available | Positive | 4621773 - 4622567 | 29128.2 |
| tetratricopeptide repeat protein | C1O30_RS20845 | Not Available | Positive | 4622579 - 4623202 | 22862.5 |
| Trna-pro | Not Available | Not Available | Positive | 4623658 - 4623734 | Not Available |
| nad-dependent dna ligase ligb | C1O30_RS20855 | Not Available | Negative | 4623877 - 4625562 | 63102.5 |
| guanylate kinase | C1O30_RS20860 | Not Available | Positive | 4625855 - 4626478 | 23598.2 |
| dna-directed rna polymerase subunit omega | C1O30_RS20865 | Not Available | Positive | 4626533 - 4626808 | 10226.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | C1O30_RS20870 | Not Available | Positive | 4626833 - 4628935 | 79314.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
