Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | C1O30_RS20770 | Not Available | Negative | 4608799 - 4609716 | 33178.7 |
| abc transporter substrate-binding protein | C1O30_RS20775 | Not Available | Negative | 4609770 - 4611140 | 50648.9 |
| rok family transcriptional regulator | C1O30_RS20780 | Not Available | Positive | 4611244 - 4612347 | 38871.0 |
| duf1471 domain-containing protein | C1O30_RS20785 | Not Available | Negative | 4612406 - 4612657 | 8457.94 |
| duf1471 domain-containing protein | C1O30_RS20795 | Not Available | Negative | 4613038 - 4613289 | 8429.88 |
| hypothetical protein | C1O30_RS20800 | Not Available | Negative | 4613466 - 4613747 | 9944.08 |
| d-serine ammonia-lyase | C1O30_RS20805 | Not Available | Positive | 4614120 - 4615490 | 49564.1 |
| gnat family n-acetyltransferase | C1O30_RS20810 | Not Available | Positive | 4615515 - 4615979 | 17202.6 |
| histidine-type phosphatase | C1O30_RS20815 | Not Available | Positive | 4616179 - 4617459 | 46934.9 |
| mfs transporter | C1O30_RS20820 | Not Available | Negative | 4617555 - 4618658 | 37524.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
