Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1820 family protein | C1O30_RS20470 | Not Available | Negative | 4539588 - 4539914 | 12252.6 |
| lysoplasmalogenase | C1O30_RS20475 | Not Available | Positive | 4540225 - 4540854 | 23479.7 |
| sulfurtransferase tusa | C1O30_RS20480 | Not Available | Negative | 4540918 - 4541163 | 9223.29 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | C1O30_RS20485 | Not Available | Positive | 4541546 - 4542214 | 25076.0 |
| dcrb family lipoprotein | C1O30_RS20490 | Not Available | Positive | 4542404 - 4542967 | 19675.4 |
| mfs transporter | C1O30_RS20495 | Not Available | Negative | 4543025 - 4544242 | 42083.8 |
| inner membrane protein yhjd | C1O30_RS20500 | Not Available | Positive | 4544457 - 4545431 | 35750.1 |
| 2-hydroxymuconate tautomerase family protein | C1O30_RS20505 | Not Available | Positive | 4545463 - 4545666 | 7264.67 |
| sugar kinase | C1O30_RS20510 | Not Available | Positive | 4545850 - 4546782 | 34163.6 |
| dmt family transporter | C1O30_RS20515 | Not Available | Negative | 4546942 - 4547805 | 31571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
