Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein tola | C1O30_RS20375 | Not Available | Negative | 4518366 - 4519226 | 29541.3 |
| methyl-accepting chemotaxis protein | C1O30_RS20380 | Not Available | Positive | 4520097 - 4521719 | 58002.5 |
| lysr family transcriptional regulator | C1O30_RS20385 | Not Available | Negative | 4521852 - 4522766 | 34012.5 |
| mfs transporter | C1O30_RS20390 | Not Available | Positive | 4523154 - 4524449 | 47041.4 |
| l(+)-tartrate dehydratase subunit alpha | C1O30_RS20395 | Not Available | Positive | 4524489 - 4525412 | 33095.5 |
| l(+)-tartrate dehydratase subunit beta | C1O30_RS20400 | Not Available | Positive | 4525406 - 4526017 | 22409.3 |
| fumarylacetoacetate hydrolase family protein | C1O30_RS20405 | Not Available | Positive | 4526090 - 4526974 | 32380.6 |
| plp-dependent aminotransferase family protein | C1O30_RS20410 | Not Available | Negative | 4527022 - 4528206 | 43610.4 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | C1O30_RS21545 | Not Available | Negative | 4528295 - 4528996 | 25687.2 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | C1O30_RS21550 | Not Available | Negative | 4529003 - 4529773 | 28300.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
