Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional repressor ygbi | C1O30_RS20320 | Not Available | Negative | 4503238 - 4503999 | 27357.3 |
| l-threonate dehydrogenase | C1O30_RS20325 | Not Available | Positive | 4504283 - 4505218 | 32574.2 |
| 3-oxo-tetronate kinase | C1O30_RS20330 | Not Available | Positive | 4505215 - 4506495 | 45441.1 |
| aldolase | C1O30_RS20335 | Not Available | Positive | 4506510 - 4507169 | 24305.1 |
| 2-oxo-tetronate isomerase | C1O30_RS20340 | Not Available | Positive | 4507172 - 4507954 | 29284.1 |
| gntp family transporter | C1O30_RS20350 | Not Available | Positive | 4508299 - 4509672 | 46869.5 |
| methyl-accepting chemotaxis protein | C1O30_RS20355 | Not Available | Positive | 4510096 - 4511784 | 60017.2 |
| methyl-accepting chemotaxis protein | C1O30_RS20360 | Not Available | Positive | 4512272 - 4513981 | 60532.9 |
| methyl-accepting chemotaxis protein | C1O30_RS20365 | Not Available | Positive | 4514558 - 4516186 | 58647.2 |
| methyl-accepting chemotaxis protein | C1O30_RS20370 | Not Available | Positive | 4516650 - 4518275 | 58275.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
