Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shlb/fhac/hecb family hemolysin secretion/activation protein | C1O30_RS20160 | Not Available | Negative | 4470115 - 4471845 | 64890.5 |
| agmatine deiminase | C1O30_RS20165 | Not Available | Negative | 4472040 - 4473137 | 40111.3 |
| n-carbamoylputrescine amidase | C1O30_RS20170 | Not Available | Negative | 4473141 - 4474025 | 32697.8 |
| hypothetical protein | C1O30_RS21535 | Not Available | Negative | 4474157 - 4474327 | 6265.31 |
| 6-phosphofructokinase | C1O30_RS20175 | Not Available | Negative | 4474329 - 4475291 | 34918.1 |
| cdf family cation-efflux transporter fief | C1O30_RS20185 | Not Available | Negative | 4475490 - 4476392 | 33056.2 |
| envelope stress sensor histidine kinase cpxa | C1O30_RS20255 | Not Available | Positive | 4488666 - 4490036 | 51544.1 |
| hypothetical protein | C1O30_RS21540 | Not Available | Negative | 4490077 - 4490274 | 6912.13 |
| hypothetical protein | C1O30_RS20260 | Not Available | Positive | 4490343 - 4492544 | 82521.8 |
| duf3142 domain-containing protein | C1O30_RS20265 | Not Available | Positive | 4492514 - 4493293 | 29500.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
