Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage baseplate assembly protein | C1O30_RS12085 | Not Available | Positive | 2672118 - 2672759 | 22464.5 |
| Baseplate assembly protein | C1O30_RS12090 | Not Available | Positive | 2672756 - 2673106 | 12657.2 |
| Baseplate assembly protein j | C1O30_RS12095 | Not Available | Positive | 2673111 - 2674019 | 32447.4 |
| Tail fibers protein | C1O30_RS12100 | Not Available | Positive | 2674012 - 2674623 | 22535.7 |
| Phage tail collar domain protein | C1O30_RS12105 | Not Available | Positive | 2674853 - 2676277 | 48102.4 |
| hypothetical protein | C1O30_RS12110 | Not Available | Positive | 2676274 - 2676501 | 8408.78 |
| mfs transporter | C1O30_RS12115 | Not Available | Positive | 2676724 - 2678070 | 47853.6 |
| dna endonuclease smra | C1O30_RS12120 | Not Available | Negative | 2678160 - 2678726 | 21596.0 |
| Tail fiber protein | C1O30_RS21710 | Not Available | Negative | 2678880 - 2679434 | 19601.1 |
| Cin | C1O30_RS12130 | Not Available | Positive | 2679489 - 2680070 | 21498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
