Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | C1O30_RS19595 | Not Available | Negative | 4348037 - 4348945 | 33475.3 |
| duf484 domain-containing protein | C1O30_RS19600 | Not Available | Negative | 4348942 - 4349643 | 26769.5 |
| diaminopimelate epimerase | C1O30_RS19605 | Not Available | Negative | 4349640 - 4350464 | 30216.2 |
| lps translocon maturation chaperone lptm | C1O30_RS19610 | Not Available | Negative | 4350553 - 4350720 | 5942.25 |
| iron donor protein cyay | C1O30_RS19615 | Not Available | Positive | 4350798 - 4351118 | 12064.8 |
| class i adenylate cyclase | C1O30_RS19620 | Not Available | Negative | 4351225 - 4353783 | 97812.9 |
| hydroxymethylbilane synthase | C1O30_RS19625 | Not Available | Positive | 4354112 - 4355050 | 33963.9 |
| uroporphyrinogen-iii synthase | C1O30_RS19630 | Not Available | Positive | 4355047 - 4355787 | 27295.9 |
| uroporphyrinogen-iii c-methyltransferase | C1O30_RS19635 | Not Available | Positive | 4355895 - 4357022 | 41560.6 |
| protoheme ix biogenesis protein hemy | C1O30_RS19640 | Not Available | Positive | 4357025 - 4358221 | 45251.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
