Dickeya zeae str. MS2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya zeae
StrainMS2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya zeae strain MS2 chromosome, complete genome.

Gene Summary

Adenine Count

1103787 bp

Thymine Count

1102832 bp

Guanine Count

1265585 bp

Cytosine Count

1267848 bp

Genome Length

4740052 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
calcium/sodium antiporterC1O30_RS01585Not AvailableNegative347787 - 34874934053.3
phospholipid abc transporter atp-binding protein mlafC1O30_RS01590Not AvailablePositive349028 - 34983429435.8
lipid asymmetry maintenance abc transporter permease subunit mlaeC1O30_RS01595Not AvailablePositive349842 - 35062427816.9
outer membrane lipid asymmetry maintenance protein mladC1O30_RS01600Not AvailablePositive350629 - 35122821504.8
phospholipid-binding protein mlacC1O30_RS01605Not AvailablePositive351240 - 35187223685.2
lipid asymmetry maintenance protein mlabC1O30_RS01610Not AvailablePositive351865 - 35215810972.2
bola family iron metabolism protein ibagC1O30_RS01615Not AvailablePositive352302 - 3525569545.5
udp-n-acetylglucosamine 1-carboxyvinyltransferaseC1O30_RS01620Not AvailablePositive352610 - 35387244689.0
outer membrane-stress sensor serine endopeptidase degsC1O30_RS01625Not AvailableNegative353956 - 35502337808.6
serine endoprotease degqC1O30_RS01630Not AvailableNegative355111 - 35648147796.6

Displaying genes 381 – 390 of 4237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.