Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine-specific dna-methyltransferase | C1O30_RS19250 | Not Available | Negative | 4262494 - 4263318 | 31865.5 |
| spor domain-containing protein | C1O30_RS19255 | Not Available | Negative | 4263396 - 4264469 | 37703.1 |
| 3-dehydroquinate synthase | C1O30_RS19260 | Not Available | Negative | 4264604 - 4265689 | 38857.4 |
| shikimate kinase arok | C1O30_RS19265 | Not Available | Negative | 4265743 - 4266264 | 19533.2 |
| dna uptake porin hofq | C1O30_RS19270 | Not Available | Negative | 4266605 - 4267906 | 47423.6 |
| hofp dna utilization family protein | C1O30_RS19275 | Not Available | Negative | 4267910 - 4268296 | 14099.0 |
| hypothetical protein | C1O30_RS19280 | Not Available | Negative | 4268293 - 4268853 | 21074.7 |
| piln domain-containing protein | C1O30_RS19285 | Not Available | Negative | 4268850 - 4269410 | 21109.6 |
| type iv pilus biogenesis protein pilm | C1O30_RS19290 | Not Available | Negative | 4269404 - 4270282 | 32441.2 |
| peptidoglycan glycosyltransferase/peptidoglycan dd-transpeptidase mrca | C1O30_RS19295 | Not Available | Positive | 4270538 - 4273096 | 93424.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
