Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator ular | C1O30_RS19105 | Not Available | Positive | 4231901 - 4232674 | 28012.8 |
| bifunctional acetylornithine/succinyldiaminopimelate transaminase | C1O30_RS19110 | Not Available | Negative | 4232827 - 4234050 | 43666.6 |
| aminodeoxychorismate synthase component ii | C1O30_RS19115 | Not Available | Negative | 4234184 - 4234759 | 21143.5 |
| is3 family transposase | C1O30_RS21725 | Not Available | Negative | 4234939 - 4235092 | 5611.85 |
| helix-turn-helix domain-containing protein | C1O30_RS19125 | Not Available | Negative | 4235102 - 4235386 | 10155.3 |
| is3 family transposase | C1O30_RS19130 | Not Available | Negative | 4235483 - 4235677 | 7083.43 |
| type ii toxin-antitoxin system rele/pare family toxin | C1O30_RS19135 | Not Available | Positive | 4235890 - 4236249 | 13685.6 |
| helix-turn-helix domain-containing protein | C1O30_RS19140 | Not Available | Positive | 4236233 - 4236556 | 11703.2 |
| atp-dependent nuclease | C1O30_RS19145 | Not Available | Negative | 4236760 - 4238262 | 57571.4 |
| aaa family atpase | C1O30_RS19150 | Not Available | Negative | 4238266 - 4238586 | 11877.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
