Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase type 1 tsac | C1O30_RS18700 | Not Available | Negative | 4169837 - 4170406 | 20776.9 |
| type i dna topoisomerase | C1O30_RS18705 | Not Available | Negative | 4170399 - 4170950 | 20598.7 |
| duf494 family protein | C1O30_RS18710 | Not Available | Negative | 4170970 - 4171443 | 18387.8 |
| dna-protecting protein dpra | C1O30_RS18715 | Not Available | Negative | 4171415 - 4172548 | 40712.0 |
| peptide deformylase | C1O30_RS18720 | Not Available | Positive | 4172661 - 4173170 | 19331.4 |
| methionyl-trna formyltransferase | C1O30_RS18725 | Not Available | Positive | 4173208 - 4174149 | 34084.2 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | C1O30_RS18730 | Not Available | Positive | 4174235 - 4175530 | 48437.5 |
| trk system potassium transporter trka | C1O30_RS18735 | Not Available | Positive | 4175572 - 4176948 | 50244.7 |
| large-conductance mechanosensitive channel protein mscl | C1O30_RS18740 | Not Available | Positive | 4177054 - 4177479 | 15711.4 |
| alternative ribosome-rescue factor a | C1O30_RS18745 | Not Available | Negative | 4177474 - 4177710 | 9018.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
